Cluster: HRGMv2_0908_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0908
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0908_9 | HRGMv2_0908_9_42 | 48366 | 49808 | - | GH32 |
| TC | HRGMv2_0908_9 | HRGMv2_0908_9_43 | 49910 | 51361 | - | 4.A.1.2.8 |
| CAZyme | HRGMv2_0908_9 | HRGMv2_0908_9_44 | 51407 | 52789 | - | GH32 |
Gene ID: HRGMv2_0908_9_42
Type: CAZyme
Location: 48366 - 49808 (-)
Type: CAZyme
Location: 48366 - 49808 (-)
Gene ID: HRGMv2_0908_9_43
Type: TC
Location: 49910 - 51361 (-)
Type: TC
Location: 49910 - 51361 (-)
Gene ID: HRGMv2_0908_9_44
Type: CAZyme
Location: 51407 - 52789 (-)
Type: CAZyme
Location: 51407 - 52789 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.