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Cluster: HRGMv2_0908_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0908_18 HRGMv2_0908_18_10 9090 10448 - 2.A.33.1.1
pfam HRGMv2_0908_18 HRGMv2_0908_18_11 10716 11639 - DHH | DHHA2
STP HRGMv2_0908_18 HRGMv2_0908_18_12 11787 12740 - Glucokinase
TC HRGMv2_0908_18 HRGMv2_0908_18_13 12982 13314 - 4.A.3.2.3
TC HRGMv2_0908_18 HRGMv2_0908_18_14 13324 13626 - 4.A.3.2.9
TC HRGMv2_0908_18 HRGMv2_0908_18_15 13788 15131 - 4.A.3.2.9
CAZyme HRGMv2_0908_18 HRGMv2_0908_18_16 15252 16652 - GH1
Gene ID: HRGMv2_0908_18_10
Type: TC
Location: 9090 - 10448 (-)
Gene ID: HRGMv2_0908_18_11
Type: pfam
Location: 10716 - 11639 (-)
Gene ID: HRGMv2_0908_18_12
Type: STP
Location: 11787 - 12740 (-)
Gene ID: HRGMv2_0908_18_13
Type: TC
Location: 12982 - 13314 (-)
Gene ID: HRGMv2_0908_18_14
Type: TC
Location: 13324 - 13626 (-)
Gene ID: HRGMv2_0908_18_15
Type: TC
Location: 13788 - 15131 (-)
Gene ID: HRGMv2_0908_18_16
Type: CAZyme
Location: 15252 - 16652 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0908_18_14 vegan > omnivore 1.11582 0.00701

🧭 Explore Read Mapping of CGC

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