dbCAN Logo

Cluster: HRGMv2_0905_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0905_34 HRGMv2_0905_34_5 5334 6839 + GH77
CAZyme HRGMv2_0905_34 HRGMv2_0905_34_6 6968 9235 + GT35
TC HRGMv2_0905_34 HRGMv2_0905_34_7 9612 10811 - 3.A.1.1.22
TC HRGMv2_0905_34 HRGMv2_0905_34_8 10879 11718 - 3.A.1.1.45
TC HRGMv2_0905_34 HRGMv2_0905_34_9 11718 12572 - 3.A.1.1.45
TC HRGMv2_0905_34 HRGMv2_0905_34_10 12660 13976 - 3.A.1.1.45
TF HRGMv2_0905_34 HRGMv2_0905_34_11 14283 15002 - GntR
TC HRGMv2_0905_34 HRGMv2_0905_34_12 15265 17682 + 4.A.1.1.8
Gene ID: HRGMv2_0905_34_5
Type: CAZyme
Location: 5334 - 6839 (+)
Gene ID: HRGMv2_0905_34_6
Type: CAZyme
Location: 6968 - 9235 (+)
Gene ID: HRGMv2_0905_34_7
Type: TC
Location: 9612 - 10811 (-)
Gene ID: HRGMv2_0905_34_8
Type: TC
Location: 10879 - 11718 (-)
Gene ID: HRGMv2_0905_34_9
Type: TC
Location: 11718 - 12572 (-)
Gene ID: HRGMv2_0905_34_10
Type: TC
Location: 12660 - 13976 (-)
Gene ID: HRGMv2_0905_34_11
Type: TF
Location: 14283 - 15002 (-)
Gene ID: HRGMv2_0905_34_12
Type: TC
Location: 15265 - 17682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List