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Cluster: HRGMv2_0905_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0905_16 HRGMv2_0905_16_10 13596 15278 + 2.A.66.4.4
pfam HRGMv2_0905_16 HRGMv2_0905_16_11 15285 17225 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0905_16 HRGMv2_0905_16_12 17591 19204 + 3.A.1.5.27
TC HRGMv2_0905_16 HRGMv2_0905_16_13 19360 20316 + 3.A.1.5.38
TC HRGMv2_0905_16 HRGMv2_0905_16_14 20320 22335 + 3.A.1.5.25
TC HRGMv2_0905_16 HRGMv2_0905_16_15 22336 23163 + 3.A.1.5.27
CAZyme HRGMv2_0905_16 HRGMv2_0905_16_16 23295 24221 + CE7
Gene ID: HRGMv2_0905_16_10
Type: TC
Location: 13596 - 15278 (+)
Gene ID: HRGMv2_0905_16_11
Type: pfam
Location: 15285 - 17225 (+)
Gene ID: HRGMv2_0905_16_12
Type: TC
Location: 17591 - 19204 (+)
Gene ID: HRGMv2_0905_16_13
Type: TC
Location: 19360 - 20316 (+)
Gene ID: HRGMv2_0905_16_14
Type: TC
Location: 20320 - 22335 (+)
Gene ID: HRGMv2_0905_16_15
Type: TC
Location: 22336 - 23163 (+)
Gene ID: HRGMv2_0905_16_16
Type: CAZyme
Location: 23295 - 24221 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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