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Cluster: HRGMv2_0902_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0902_20 HRGMv2_0902_20_3 3616 5832 + 2.A.66.4.4
pfam HRGMv2_0902_20 HRGMv2_0902_20_4 5839 7779 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0902_20 HRGMv2_0902_20_5 8145 9758 + 3.A.1.5.27
TC HRGMv2_0902_20 HRGMv2_0902_20_6 9916 10872 + 3.A.1.5.38
TC HRGMv2_0902_20 HRGMv2_0902_20_7 10876 12891 + 3.A.1.5.25
TC HRGMv2_0902_20 HRGMv2_0902_20_8 12892 13719 + 3.A.1.5.27
CAZyme HRGMv2_0902_20 HRGMv2_0902_20_9 13851 14777 + CE7
Gene ID: HRGMv2_0902_20_3
Type: TC
Location: 3616 - 5832 (+)
Gene ID: HRGMv2_0902_20_4
Type: pfam
Location: 5839 - 7779 (+)
Gene ID: HRGMv2_0902_20_5
Type: TC
Location: 8145 - 9758 (+)
Gene ID: HRGMv2_0902_20_6
Type: TC
Location: 9916 - 10872 (+)
Gene ID: HRGMv2_0902_20_7
Type: TC
Location: 10876 - 12891 (+)
Gene ID: HRGMv2_0902_20_8
Type: TC
Location: 12892 - 13719 (+)
Gene ID: HRGMv2_0902_20_9
Type: CAZyme
Location: 13851 - 14777 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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