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Cluster: HRGMv2_0902_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0902_16 HRGMv2_0902_16_11 14913 17363 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0902_16 HRGMv2_0902_16_12 17385 17501 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0902_16 HRGMv2_0902_16_13 17588 18307 + GntR
TC HRGMv2_0902_16 HRGMv2_0902_16_14 18601 19917 + 3.A.1.1.45
TC HRGMv2_0902_16 HRGMv2_0902_16_15 20005 20859 + 3.A.1.1.45
TC HRGMv2_0902_16 HRGMv2_0902_16_16 20859 21698 + 3.A.1.1.45
TC HRGMv2_0902_16 HRGMv2_0902_16_17 21767 22966 + 3.A.1.1.22
CAZyme HRGMv2_0902_16 HRGMv2_0902_16_18 23502 25769 - GT35
CAZyme HRGMv2_0902_16 HRGMv2_0902_16_19 25898 27403 - GH77
Gene ID: HRGMv2_0902_16_11
Type: TC
Location: 14913 - 17363 (-)
Gene ID: HRGMv2_0902_16_12
Type:
Location: 17385 - 17501 (+)
Gene ID: HRGMv2_0902_16_13
Type: TF
Location: 17588 - 18307 (+)
Gene ID: HRGMv2_0902_16_14
Type: TC
Location: 18601 - 19917 (+)
Gene ID: HRGMv2_0902_16_15
Type: TC
Location: 20005 - 20859 (+)
Gene ID: HRGMv2_0902_16_16
Type: TC
Location: 20859 - 21698 (+)
Gene ID: HRGMv2_0902_16_17
Type: TC
Location: 21767 - 22966 (+)
Gene ID: HRGMv2_0902_16_18
Type: CAZyme
Location: 23502 - 25769 (-)
Gene ID: HRGMv2_0902_16_19
Type: CAZyme
Location: 25898 - 27403 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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