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Cluster: HRGMv2_0902_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0902_10 HRGMv2_0902_10_57 60504 61925 - GH1
TC HRGMv2_0902_10 HRGMv2_0902_10_58 62001 63785 - 4.A.3.1.1
TF HRGMv2_0902_10 HRGMv2_0902_10_59 64060 65070 + LacI
CAZyme HRGMv2_0902_10 HRGMv2_0902_10_60 65406 66845 - GH1
TC HRGMv2_0902_10 HRGMv2_0902_10_61 66912 68687 - 4.A.3.1.1
TF HRGMv2_0902_10 HRGMv2_0902_10_62 69045 70049 + LacI
TC HRGMv2_0902_10 HRGMv2_0902_10_63 70264 70602 + 4.A.3.1.2
Gene ID: HRGMv2_0902_10_57
Type: CAZyme
Location: 60504 - 61925 (-)
Gene ID: HRGMv2_0902_10_58
Type: TC
Location: 62001 - 63785 (-)
Gene ID: HRGMv2_0902_10_59
Type: TF
Location: 64060 - 65070 (+)
Gene ID: HRGMv2_0902_10_60
Type: CAZyme
Location: 65406 - 66845 (-)
Gene ID: HRGMv2_0902_10_61
Type: TC
Location: 66912 - 68687 (-)
Gene ID: HRGMv2_0902_10_62
Type: TF
Location: 69045 - 70049 (+)
Gene ID: HRGMv2_0902_10_63
Type: TC
Location: 70264 - 70602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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