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Cluster: HRGMv2_0900_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0900_8 HRGMv2_0900_8_49 58585 59379 - 3.A.1.34.1
TC HRGMv2_0900_8 HRGMv2_0900_8_50 59372 60295 - 3.A.1.34.1
TC HRGMv2_0900_8 HRGMv2_0900_8_51 60500 61480 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0900_8 HRGMv2_0900_8_52 61641 62426 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0900_8 HRGMv2_0900_8_53 62685 64088 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0900_8 HRGMv2_0900_8_54 64270 64833 - 4.A.1.2.6
peptidase HRGMv2_0900_8 HRGMv2_0900_8_55 65077 65976 + S09.UPW
TC HRGMv2_0900_8 HRGMv2_0900_8_56 66517 68877 + 9.A.8.1.6
TC HRGMv2_0900_8 HRGMv2_0900_8_57 68998 70194 + 2.A.1.2.18
CAZyme HRGMv2_0900_8 HRGMv2_0900_8_58 70348 71724 + GH13_20
Gene ID: HRGMv2_0900_8_49
Type: TC
Location: 58585 - 59379 (-)
Gene ID: HRGMv2_0900_8_50
Type: TC
Location: 59372 - 60295 (-)
Gene ID: HRGMv2_0900_8_51
Type: TC
Location: 60500 - 61480 (-)
Gene ID: HRGMv2_0900_8_52
Type:
Location: 61641 - 62426 (-)
Gene ID: HRGMv2_0900_8_53
Type: pfam
Location: 62685 - 64088 (-)
Gene ID: HRGMv2_0900_8_54
Type: TC
Location: 64270 - 64833 (-)
Gene ID: HRGMv2_0900_8_55
Type: peptidase
Location: 65077 - 65976 (+)
Gene ID: HRGMv2_0900_8_56
Type: TC
Location: 66517 - 68877 (+)
Gene ID: HRGMv2_0900_8_57
Type: TC
Location: 68998 - 70194 (+)
Gene ID: HRGMv2_0900_8_58
Type: CAZyme
Location: 70348 - 71724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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