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Cluster: HRGMv2_0900_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0900_2 HRGMv2_0900_2_117 122849 125188 - 3.A.3.5.15
STP HRGMv2_0900_2 HRGMv2_0900_2_118 125862 127946 - Pkinase
STP HRGMv2_0900_2 HRGMv2_0900_2_119 128118 129080 - FHA
TC HRGMv2_0900_2 HRGMv2_0900_2_120 129669 131927 + 1.I.1.1.3
STP HRGMv2_0900_2 HRGMv2_0900_2_121 132549 133310 + Fer4
TC HRGMv2_0900_2 HRGMv2_0900_2_122 133654 134166 + 4.A.1.2.5
pfam HRGMv2_0900_2 HRGMv2_0900_2_123 134185 135039 + PRD | PRD | CAT_RBD
TC HRGMv2_0900_2 HRGMv2_0900_2_124 135139 136755 + 4.A.1.1.3
CAZyme HRGMv2_0900_2 HRGMv2_0900_2_125 136759 138141 + GH4
Gene ID: HRGMv2_0900_2_117
Type: TC
Location: 122849 - 125188 (-)
Gene ID: HRGMv2_0900_2_118
Type: STP
Location: 125862 - 127946 (-)
Gene ID: HRGMv2_0900_2_119
Type: STP
Location: 128118 - 129080 (-)
Gene ID: HRGMv2_0900_2_120
Type: TC
Location: 129669 - 131927 (+)
Gene ID: HRGMv2_0900_2_121
Type: STP
Location: 132549 - 133310 (+)
Gene ID: HRGMv2_0900_2_122
Type: TC
Location: 133654 - 134166 (+)
Gene ID: HRGMv2_0900_2_123
Type: pfam
Location: 134185 - 135039 (+)
Gene ID: HRGMv2_0900_2_124
Type: TC
Location: 135139 - 136755 (+)
Gene ID: HRGMv2_0900_2_125
Type: CAZyme
Location: 136759 - 138141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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