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Cluster: HRGMv2_0900_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0900_21 HRGMv2_0900_21_10 8921 10426 + GH77
CAZyme HRGMv2_0900_21 HRGMv2_0900_21_11 10556 12823 + GT35
TC HRGMv2_0900_21 HRGMv2_0900_21_12 13279 14478 - 3.A.1.1.22
TC HRGMv2_0900_21 HRGMv2_0900_21_13 14547 15386 - 3.A.1.1.45
TC HRGMv2_0900_21 HRGMv2_0900_21_14 15386 16240 - 3.A.1.1.45
TC HRGMv2_0900_21 HRGMv2_0900_21_15 16328 17644 - 3.A.1.1.45
TF HRGMv2_0900_21 HRGMv2_0900_21_16 17951 18670 - GntR
TC HRGMv2_0900_21 HRGMv2_0900_21_17 18880 21348 + 4.A.1.1.8
Gene ID: HRGMv2_0900_21_10
Type: CAZyme
Location: 8921 - 10426 (+)
Gene ID: HRGMv2_0900_21_11
Type: CAZyme
Location: 10556 - 12823 (+)
Gene ID: HRGMv2_0900_21_12
Type: TC
Location: 13279 - 14478 (-)
Gene ID: HRGMv2_0900_21_13
Type: TC
Location: 14547 - 15386 (-)
Gene ID: HRGMv2_0900_21_14
Type: TC
Location: 15386 - 16240 (-)
Gene ID: HRGMv2_0900_21_15
Type: TC
Location: 16328 - 17644 (-)
Gene ID: HRGMv2_0900_21_16
Type: TF
Location: 17951 - 18670 (-)
Gene ID: HRGMv2_0900_21_17
Type: TC
Location: 18880 - 21348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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