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Cluster: HRGMv2_0900_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0900_17 HRGMv2_0900_17_17 17433 18359 - CE7
TC HRGMv2_0900_17 HRGMv2_0900_17_18 18491 19318 - 3.A.1.5.27
TC HRGMv2_0900_17 HRGMv2_0900_17_19 19319 21334 - 3.A.1.5.25
TC HRGMv2_0900_17 HRGMv2_0900_17_20 21338 22294 - 3.A.1.5.38
TC HRGMv2_0900_17 HRGMv2_0900_17_21 22452 24065 - 3.A.1.5.27
pfam HRGMv2_0900_17 HRGMv2_0900_17_22 24431 26371 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0900_17 HRGMv2_0900_17_23 26378 28060 - 2.A.66.4.4
Gene ID: HRGMv2_0900_17_17
Type: CAZyme
Location: 17433 - 18359 (-)
Gene ID: HRGMv2_0900_17_18
Type: TC
Location: 18491 - 19318 (-)
Gene ID: HRGMv2_0900_17_19
Type: TC
Location: 19319 - 21334 (-)
Gene ID: HRGMv2_0900_17_20
Type: TC
Location: 21338 - 22294 (-)
Gene ID: HRGMv2_0900_17_21
Type: TC
Location: 22452 - 24065 (-)
Gene ID: HRGMv2_0900_17_22
Type: pfam
Location: 24431 - 26371 (-)
Gene ID: HRGMv2_0900_17_23
Type: TC
Location: 26378 - 28060 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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