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Cluster: HRGMv2_0900_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0900_16 HRGMv2_0900_16_39 48123 49292 - CE9
STP HRGMv2_0900_16 HRGMv2_0900_16_40 49411 50577 - SIS | SIS
TF HRGMv2_0900_16 HRGMv2_0900_16_41 50692 51423 - GntR
TC HRGMv2_0900_16 HRGMv2_0900_16_42 51609 52691 - 4.A.6.1.4
TC HRGMv2_0900_16 HRGMv2_0900_16_43 52681 53481 - 4.A.6.1.4
TC HRGMv2_0900_16 HRGMv2_0900_16_44 53572 54054 - 4.A.6.1.4
pfam HRGMv2_0900_16 HRGMv2_0900_16_45 54091 54372 - YajC
TC HRGMv2_0900_16 HRGMv2_0900_16_46 54372 54815 - 4.A.6.1.16
Gene ID: HRGMv2_0900_16_39
Type: CAZyme
Location: 48123 - 49292 (-)
Gene ID: HRGMv2_0900_16_40
Type: STP
Location: 49411 - 50577 (-)
Gene ID: HRGMv2_0900_16_41
Type: TF
Location: 50692 - 51423 (-)
Gene ID: HRGMv2_0900_16_42
Type: TC
Location: 51609 - 52691 (-)
Gene ID: HRGMv2_0900_16_43
Type: TC
Location: 52681 - 53481 (-)
Gene ID: HRGMv2_0900_16_44
Type: TC
Location: 53572 - 54054 (-)
Gene ID: HRGMv2_0900_16_45
Type: pfam
Location: 54091 - 54372 (-)
Gene ID: HRGMv2_0900_16_46
Type: TC
Location: 54372 - 54815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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