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Cluster: HRGMv2_0900_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0900_16 HRGMv2_0900_16_24 29680 30018 - 4.A.3.1.2
TF HRGMv2_0900_16 HRGMv2_0900_16_25 30233 31237 - LacI
TC HRGMv2_0900_16 HRGMv2_0900_16_26 31596 33371 + 4.A.3.1.1
CAZyme HRGMv2_0900_16 HRGMv2_0900_16_27 33438 34877 + GH1
TF HRGMv2_0900_16 HRGMv2_0900_16_28 35222 36232 - LacI
TC HRGMv2_0900_16 HRGMv2_0900_16_29 36509 38287 + 4.A.3.1.1
CAZyme HRGMv2_0900_16 HRGMv2_0900_16_30 38364 39785 + GH1
TF HRGMv2_0900_16 HRGMv2_0900_16_31 40360 41124 - HTH_DeoR
sulfatase HRGMv2_0900_16 HRGMv2_0900_16_32 41331 42383 + S1_4
TC HRGMv2_0900_16 HRGMv2_0900_16_33 42710 43192 - 4.A.6.1.5
Gene ID: HRGMv2_0900_16_24
Type: TC
Location: 29680 - 30018 (-)
Gene ID: HRGMv2_0900_16_25
Type: TF
Location: 30233 - 31237 (-)
Gene ID: HRGMv2_0900_16_26
Type: TC
Location: 31596 - 33371 (+)
Gene ID: HRGMv2_0900_16_27
Type: CAZyme
Location: 33438 - 34877 (+)
Gene ID: HRGMv2_0900_16_28
Type: TF
Location: 35222 - 36232 (-)
Gene ID: HRGMv2_0900_16_29
Type: TC
Location: 36509 - 38287 (+)
Gene ID: HRGMv2_0900_16_30
Type: CAZyme
Location: 38364 - 39785 (+)
Gene ID: HRGMv2_0900_16_31
Type: TF
Location: 40360 - 41124 (-)
Gene ID: HRGMv2_0900_16_32
Type: sulfatase
Location: 41331 - 42383 (+)
Gene ID: HRGMv2_0900_16_33
Type: TC
Location: 42710 - 43192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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