dbCAN Logo

Cluster: HRGMv2_0899_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0899_9 HRGMv2_0899_9_38 40363 41850 - GH1
TC HRGMv2_0899_9 HRGMv2_0899_9_39 41936 42277 - 4.A.3.2.1
TC HRGMv2_0899_9 HRGMv2_0899_9_40 42280 42576 - 4.A.3.2.6
TC HRGMv2_0899_9 HRGMv2_0899_9_41 42625 43917 - 4.A.3.2.2
pfam HRGMv2_0899_9 HRGMv2_0899_9_42 44072 44839 - YdjC
TF HRGMv2_0899_9 HRGMv2_0899_9_43 45128 45949 + HTH_6
CAZyme HRGMv2_0899_9 HRGMv2_0899_9_44 45970 47358 - GH1
Gene ID: HRGMv2_0899_9_38
Type: CAZyme
Location: 40363 - 41850 (-)
Gene ID: HRGMv2_0899_9_39
Type: TC
Location: 41936 - 42277 (-)
Gene ID: HRGMv2_0899_9_40
Type: TC
Location: 42280 - 42576 (-)
Gene ID: HRGMv2_0899_9_41
Type: TC
Location: 42625 - 43917 (-)
Gene ID: HRGMv2_0899_9_42
Type: pfam
Location: 44072 - 44839 (-)
Gene ID: HRGMv2_0899_9_43
Type: TF
Location: 45128 - 45949 (+)
Gene ID: HRGMv2_0899_9_44
Type: CAZyme
Location: 45970 - 47358 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List