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Cluster: HRGMv2_0899_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0899_5 HRGMv2_0899_5_75 75332 75775 + 4.A.6.1.16
pfam HRGMv2_0899_5 HRGMv2_0899_5_76 75775 76056 + YajC
TC HRGMv2_0899_5 HRGMv2_0899_5_77 76093 76575 + 4.A.6.1.4
TC HRGMv2_0899_5 HRGMv2_0899_5_78 76666 77466 + 4.A.6.1.4
TC HRGMv2_0899_5 HRGMv2_0899_5_79 77456 78538 + 4.A.6.1.4
TF HRGMv2_0899_5 HRGMv2_0899_5_80 78724 79455 + GntR
STP HRGMv2_0899_5 HRGMv2_0899_5_81 79570 80736 + SIS | SIS
CAZyme HRGMv2_0899_5 HRGMv2_0899_5_82 80854 82023 + CE9
Gene ID: HRGMv2_0899_5_75
Type: TC
Location: 75332 - 75775 (+)
Gene ID: HRGMv2_0899_5_76
Type: pfam
Location: 75775 - 76056 (+)
Gene ID: HRGMv2_0899_5_77
Type: TC
Location: 76093 - 76575 (+)
Gene ID: HRGMv2_0899_5_78
Type: TC
Location: 76666 - 77466 (+)
Gene ID: HRGMv2_0899_5_79
Type: TC
Location: 77456 - 78538 (+)
Gene ID: HRGMv2_0899_5_80
Type: TF
Location: 78724 - 79455 (+)
Gene ID: HRGMv2_0899_5_81
Type: STP
Location: 79570 - 80736 (+)
Gene ID: HRGMv2_0899_5_82
Type: CAZyme
Location: 80854 - 82023 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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