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Cluster: HRGMv2_0899_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0899_5 HRGMv2_0899_5_42 42032 43432 + GH1
TC HRGMv2_0899_5 HRGMv2_0899_5_43 43553 44905 + 4.A.3.2.2
TC HRGMv2_0899_5 HRGMv2_0899_5_44 45059 45361 + 4.A.3.2.9
pfam HRGMv2_0899_5 HRGMv2_0899_5_45 45371 45703 + PTS_IIA
sulfatase HRGMv2_0899_5 HRGMv2_0899_5_46 45841 46512 + S1_11
TC HRGMv2_0899_5 HRGMv2_0899_5_47 46522 46830 + 4.A.3.2.8
pfam HRGMv2_0899_5 HRGMv2_0899_5_48 47019 47972 + ROK
pfam HRGMv2_0899_5 HRGMv2_0899_5_49 48140 49063 + DHH | DHHA2
TC HRGMv2_0899_5 HRGMv2_0899_5_50 49332 50690 + 2.A.33.1.1
Gene ID: HRGMv2_0899_5_42
Type: CAZyme
Location: 42032 - 43432 (+)
Gene ID: HRGMv2_0899_5_43
Type: TC
Location: 43553 - 44905 (+)
Gene ID: HRGMv2_0899_5_44
Type: TC
Location: 45059 - 45361 (+)
Gene ID: HRGMv2_0899_5_45
Type: pfam
Location: 45371 - 45703 (+)
Gene ID: HRGMv2_0899_5_46
Type: sulfatase
Location: 45841 - 46512 (+)
Gene ID: HRGMv2_0899_5_47
Type: TC
Location: 46522 - 46830 (+)
Gene ID: HRGMv2_0899_5_48
Type: pfam
Location: 47019 - 47972 (+)
Gene ID: HRGMv2_0899_5_49
Type: pfam
Location: 48140 - 49063 (+)
Gene ID: HRGMv2_0899_5_50
Type: TC
Location: 49332 - 50690 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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