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Cluster: HRGMv2_0899_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0899_27 HRGMv2_0899_27_10 10684 11022 - 4.A.3.1.2
TF HRGMv2_0899_27 HRGMv2_0899_27_11 11237 12241 - LacI
TC HRGMv2_0899_27 HRGMv2_0899_27_12 12599 14383 + 4.A.3.1.1
CAZyme HRGMv2_0899_27 HRGMv2_0899_27_13 14450 15889 + GH1
TF HRGMv2_0899_27 HRGMv2_0899_27_14 16152 17189 - LacI
CAZyme HRGMv2_0899_27 HRGMv2_0899_27_15 17531 18973 + GH1
TC HRGMv2_0899_27 HRGMv2_0899_27_16 19150 20910 + 4.A.3.1.1
TF HRGMv2_0899_27 HRGMv2_0899_27_17 21163 22173 - LacI
TC HRGMv2_0899_27 HRGMv2_0899_27_18 22449 24227 + 4.A.3.1.1
CAZyme HRGMv2_0899_27 HRGMv2_0899_27_19 24303 25724 + GH1
Gene ID: HRGMv2_0899_27_10
Type: TC
Location: 10684 - 11022 (-)
Gene ID: HRGMv2_0899_27_11
Type: TF
Location: 11237 - 12241 (-)
Gene ID: HRGMv2_0899_27_12
Type: TC
Location: 12599 - 14383 (+)
Gene ID: HRGMv2_0899_27_13
Type: CAZyme
Location: 14450 - 15889 (+)
Gene ID: HRGMv2_0899_27_14
Type: TF
Location: 16152 - 17189 (-)
Gene ID: HRGMv2_0899_27_15
Type: CAZyme
Location: 17531 - 18973 (+)
Gene ID: HRGMv2_0899_27_16
Type: TC
Location: 19150 - 20910 (+)
Gene ID: HRGMv2_0899_27_17
Type: TF
Location: 21163 - 22173 (-)
Gene ID: HRGMv2_0899_27_18
Type: TC
Location: 22449 - 24227 (+)
Gene ID: HRGMv2_0899_27_19
Type: CAZyme
Location: 24303 - 25724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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