Cluster: HRGMv2_0899_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0899_21 | HRGMv2_0899_21_13 | 18329 | 19711 | + | GH32 |
| TC | HRGMv2_0899_21 | HRGMv2_0899_21_14 | 19757 | 21208 | + | 4.A.1.2.8 |
| CAZyme | HRGMv2_0899_21 | HRGMv2_0899_21_15 | 21310 | 22752 | + | GH32 |
Gene ID: HRGMv2_0899_21_13
Type: CAZyme
Location: 18329 - 19711 (+)
Type: CAZyme
Location: 18329 - 19711 (+)
Gene ID: HRGMv2_0899_21_14
Type: TC
Location: 19757 - 21208 (+)
Type: TC
Location: 19757 - 21208 (+)
Gene ID: HRGMv2_0899_21_15
Type: CAZyme
Location: 21310 - 22752 (+)
Type: CAZyme
Location: 21310 - 22752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_F
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.