dbCAN Logo

Cluster: HRGMv2_0899_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0899_17 HRGMv2_0899_17_10 13588 15270 + 2.A.66.4.4
pfam HRGMv2_0899_17 HRGMv2_0899_17_11 15277 17217 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0899_17 HRGMv2_0899_17_12 17583 19196 + 3.A.1.5.27
TC HRGMv2_0899_17 HRGMv2_0899_17_13 19352 20308 + 3.A.1.5.38
TC HRGMv2_0899_17 HRGMv2_0899_17_14 20312 22327 + 3.A.1.5.25
TC HRGMv2_0899_17 HRGMv2_0899_17_15 22328 23155 + 3.A.1.5.27
CAZyme HRGMv2_0899_17 HRGMv2_0899_17_16 23287 24213 + CE7
Gene ID: HRGMv2_0899_17_10
Type: TC
Location: 13588 - 15270 (+)
Gene ID: HRGMv2_0899_17_11
Type: pfam
Location: 15277 - 17217 (+)
Gene ID: HRGMv2_0899_17_12
Type: TC
Location: 17583 - 19196 (+)
Gene ID: HRGMv2_0899_17_13
Type: TC
Location: 19352 - 20308 (+)
Gene ID: HRGMv2_0899_17_14
Type: TC
Location: 20312 - 22327 (+)
Gene ID: HRGMv2_0899_17_15
Type: TC
Location: 22328 - 23155 (+)
Gene ID: HRGMv2_0899_17_16
Type: CAZyme
Location: 23287 - 24213 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List