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Cluster: HRGMv2_0898_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0898_22 HRGMv2_0898_22_10 8910 10415 + GH77
CAZyme HRGMv2_0898_22 HRGMv2_0898_22_11 10544 12811 + GT35
TC HRGMv2_0898_22 HRGMv2_0898_22_12 13269 14468 - 3.A.1.1.22
TC HRGMv2_0898_22 HRGMv2_0898_22_13 14537 15376 - 3.A.1.1.45
TC HRGMv2_0898_22 HRGMv2_0898_22_14 15376 16230 - 3.A.1.1.45
TC HRGMv2_0898_22 HRGMv2_0898_22_15 16318 17634 - 3.A.1.1.45
TF HRGMv2_0898_22 HRGMv2_0898_22_16 17941 18660 - GntR
TC HRGMv2_0898_22 HRGMv2_0898_22_17 18890 21340 + 4.A.1.1.8
Gene ID: HRGMv2_0898_22_10
Type: CAZyme
Location: 8910 - 10415 (+)
Gene ID: HRGMv2_0898_22_11
Type: CAZyme
Location: 10544 - 12811 (+)
Gene ID: HRGMv2_0898_22_12
Type: TC
Location: 13269 - 14468 (-)
Gene ID: HRGMv2_0898_22_13
Type: TC
Location: 14537 - 15376 (-)
Gene ID: HRGMv2_0898_22_14
Type: TC
Location: 15376 - 16230 (-)
Gene ID: HRGMv2_0898_22_15
Type: TC
Location: 16318 - 17634 (-)
Gene ID: HRGMv2_0898_22_16
Type: TF
Location: 17941 - 18660 (-)
Gene ID: HRGMv2_0898_22_17
Type: TC
Location: 18890 - 21340 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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