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Cluster: HRGMv2_0898_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0898_20 HRGMv2_0898_20_17 17435 18361 - CE7
TC HRGMv2_0898_20 HRGMv2_0898_20_18 18493 19320 - 3.A.1.5.27
TC HRGMv2_0898_20 HRGMv2_0898_20_19 19321 21336 - 3.A.1.5.25
TC HRGMv2_0898_20 HRGMv2_0898_20_20 21340 22296 - 3.A.1.5.38
TC HRGMv2_0898_20 HRGMv2_0898_20_21 22454 24067 - 3.A.1.5.27
pfam HRGMv2_0898_20 HRGMv2_0898_20_22 24431 26371 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0898_20 HRGMv2_0898_20_23 26378 28060 - 2.A.66.4.4
Gene ID: HRGMv2_0898_20_17
Type: CAZyme
Location: 17435 - 18361 (-)
Gene ID: HRGMv2_0898_20_18
Type: TC
Location: 18493 - 19320 (-)
Gene ID: HRGMv2_0898_20_19
Type: TC
Location: 19321 - 21336 (-)
Gene ID: HRGMv2_0898_20_20
Type: TC
Location: 21340 - 22296 (-)
Gene ID: HRGMv2_0898_20_21
Type: TC
Location: 22454 - 24067 (-)
Gene ID: HRGMv2_0898_20_22
Type: pfam
Location: 24431 - 26371 (-)
Gene ID: HRGMv2_0898_20_23
Type: TC
Location: 26378 - 28060 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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