dbCAN Logo

Cluster: HRGMv2_0897_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0897_5 HRGMv2_0897_5_79 82219 82662 + 4.A.6.1.16
pfam HRGMv2_0897_5 HRGMv2_0897_5_80 82662 82943 + YajC
TC HRGMv2_0897_5 HRGMv2_0897_5_81 82980 83462 + 4.A.6.1.4
TC HRGMv2_0897_5 HRGMv2_0897_5_82 83553 84353 + 4.A.6.1.4
TC HRGMv2_0897_5 HRGMv2_0897_5_83 84343 85425 + 4.A.6.1.4
TF HRGMv2_0897_5 HRGMv2_0897_5_84 85611 86342 + GntR
STP HRGMv2_0897_5 HRGMv2_0897_5_85 86457 87623 + SIS | SIS
CAZyme HRGMv2_0897_5 HRGMv2_0897_5_86 87741 88910 + CE9
Gene ID: HRGMv2_0897_5_79
Type: TC
Location: 82219 - 82662 (+)
Gene ID: HRGMv2_0897_5_80
Type: pfam
Location: 82662 - 82943 (+)
Gene ID: HRGMv2_0897_5_81
Type: TC
Location: 82980 - 83462 (+)
Gene ID: HRGMv2_0897_5_82
Type: TC
Location: 83553 - 84353 (+)
Gene ID: HRGMv2_0897_5_83
Type: TC
Location: 84343 - 85425 (+)
Gene ID: HRGMv2_0897_5_84
Type: TF
Location: 85611 - 86342 (+)
Gene ID: HRGMv2_0897_5_85
Type: STP
Location: 86457 - 87623 (+)
Gene ID: HRGMv2_0897_5_86
Type: CAZyme
Location: 87741 - 88910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List