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Cluster: HRGMv2_0897_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0897_3 HRGMv2_0897_3_162 173676 176018 - 3.A.3.5.15
STP HRGMv2_0897_3 HRGMv2_0897_3_163 176349 178433 - Pkinase
STP HRGMv2_0897_3 HRGMv2_0897_3_164 178605 179567 - FHA
TC HRGMv2_0897_3 HRGMv2_0897_3_165 180157 182406 + 1.I.1.1.3
STP HRGMv2_0897_3 HRGMv2_0897_3_166 183031 183792 + Fer4
TC HRGMv2_0897_3 HRGMv2_0897_3_167 184136 184648 + 4.A.1.2.5
pfam HRGMv2_0897_3 HRGMv2_0897_3_168 184667 185521 + PRD | PRD | CAT_RBD
TC HRGMv2_0897_3 HRGMv2_0897_3_169 185621 187237 + 4.A.1.1.3
CAZyme HRGMv2_0897_3 HRGMv2_0897_3_170 187241 188623 + GH4
Gene ID: HRGMv2_0897_3_162
Type: TC
Location: 173676 - 176018 (-)
Gene ID: HRGMv2_0897_3_163
Type: STP
Location: 176349 - 178433 (-)
Gene ID: HRGMv2_0897_3_164
Type: STP
Location: 178605 - 179567 (-)
Gene ID: HRGMv2_0897_3_165
Type: TC
Location: 180157 - 182406 (+)
Gene ID: HRGMv2_0897_3_166
Type: STP
Location: 183031 - 183792 (+)
Gene ID: HRGMv2_0897_3_167
Type: TC
Location: 184136 - 184648 (+)
Gene ID: HRGMv2_0897_3_168
Type: pfam
Location: 184667 - 185521 (+)
Gene ID: HRGMv2_0897_3_169
Type: TC
Location: 185621 - 187237 (+)
Gene ID: HRGMv2_0897_3_170
Type: CAZyme
Location: 187241 - 188623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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