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Cluster: HRGMv2_0897_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0897_2 HRGMv2_0897_2_37 41625 44921 - GH13_39 | GH77
CAZyme HRGMv2_0897_2 HRGMv2_0897_2_38 45137 47467 - GT5
pfam HRGMv2_0897_2 HRGMv2_0897_2_39 47558 48685 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0897_2 HRGMv2_0897_2_40 48690 49838 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0897_2 HRGMv2_0897_2_41 49944 52370 - GT35
CAZyme HRGMv2_0897_2 HRGMv2_0897_2_42 52464 54722 - CBM48 | GH13_9
pfam HRGMv2_0897_2 HRGMv2_0897_2_43 55069 56409 + Hydrolase | TPK_catalytic | TPK_B1_binding | HAD | HAD_2
pfam HRGMv2_0897_2 HRGMv2_0897_2_44 57331 57876 + KOW | NusG
TC HRGMv2_0897_2 HRGMv2_0897_2_45 57943 58692 + 9.B.18.1.2
CAZyme HRGMv2_0897_2 HRGMv2_0897_2_46 58692 59858 + GT4
Gene ID: HRGMv2_0897_2_37
Type: CAZyme
Location: 41625 - 44921 (-)
Gene ID: HRGMv2_0897_2_38
Type: CAZyme
Location: 45137 - 47467 (-)
Gene ID: HRGMv2_0897_2_39
Type: pfam
Location: 47558 - 48685 (-)
Gene ID: HRGMv2_0897_2_40
Type: pfam
Location: 48690 - 49838 (-)
Gene ID: HRGMv2_0897_2_41
Type: CAZyme
Location: 49944 - 52370 (-)
Gene ID: HRGMv2_0897_2_42
Type: CAZyme
Location: 52464 - 54722 (-)
Gene ID: HRGMv2_0897_2_43
Type: pfam
Location: 55069 - 56409 (+)
Gene ID: HRGMv2_0897_2_44
Type: pfam
Location: 57331 - 57876 (+)
Gene ID: HRGMv2_0897_2_45
Type: TC
Location: 57943 - 58692 (+)
Gene ID: HRGMv2_0897_2_46
Type: CAZyme
Location: 58692 - 59858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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