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Cluster: HRGMv2_0897_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0897_21 HRGMv2_0897_21_11 15280 17730 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0897_21 HRGMv2_0897_21_12 17752 17871 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0897_21 HRGMv2_0897_21_13 17955 18674 + GntR
TC HRGMv2_0897_21 HRGMv2_0897_21_14 18981 20297 + 3.A.1.1.45
TC HRGMv2_0897_21 HRGMv2_0897_21_15 20385 21239 + 3.A.1.1.45
TC HRGMv2_0897_21 HRGMv2_0897_21_16 21239 22078 + 3.A.1.1.45
TC HRGMv2_0897_21 HRGMv2_0897_21_17 22147 23346 + 3.A.1.1.22
CAZyme HRGMv2_0897_21 HRGMv2_0897_21_18 23802 26069 - GT35
CAZyme HRGMv2_0897_21 HRGMv2_0897_21_19 26198 27703 - GH77
Gene ID: HRGMv2_0897_21_11
Type: TC
Location: 15280 - 17730 (-)
Gene ID: HRGMv2_0897_21_12
Type:
Location: 17752 - 17871 (+)
Gene ID: HRGMv2_0897_21_13
Type: TF
Location: 17955 - 18674 (+)
Gene ID: HRGMv2_0897_21_14
Type: TC
Location: 18981 - 20297 (+)
Gene ID: HRGMv2_0897_21_15
Type: TC
Location: 20385 - 21239 (+)
Gene ID: HRGMv2_0897_21_16
Type: TC
Location: 21239 - 22078 (+)
Gene ID: HRGMv2_0897_21_17
Type: TC
Location: 22147 - 23346 (+)
Gene ID: HRGMv2_0897_21_18
Type: CAZyme
Location: 23802 - 26069 (-)
Gene ID: HRGMv2_0897_21_19
Type: CAZyme
Location: 26198 - 27703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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