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Cluster: HRGMv2_0897_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0897_17 HRGMv2_0897_17_10 13589 15271 + 2.A.66.4.4
pfam HRGMv2_0897_17 HRGMv2_0897_17_11 15278 17218 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0897_17 HRGMv2_0897_17_12 17584 19197 + 3.A.1.5.27
TC HRGMv2_0897_17 HRGMv2_0897_17_13 19353 20309 + 3.A.1.5.38
TC HRGMv2_0897_17 HRGMv2_0897_17_14 20313 22328 + 3.A.1.5.25
TC HRGMv2_0897_17 HRGMv2_0897_17_15 22329 23156 + 3.A.1.5.27
CAZyme HRGMv2_0897_17 HRGMv2_0897_17_16 23288 24214 + CE7
Gene ID: HRGMv2_0897_17_10
Type: TC
Location: 13589 - 15271 (+)
Gene ID: HRGMv2_0897_17_11
Type: pfam
Location: 15278 - 17218 (+)
Gene ID: HRGMv2_0897_17_12
Type: TC
Location: 17584 - 19197 (+)
Gene ID: HRGMv2_0897_17_13
Type: TC
Location: 19353 - 20309 (+)
Gene ID: HRGMv2_0897_17_14
Type: TC
Location: 20313 - 22328 (+)
Gene ID: HRGMv2_0897_17_15
Type: TC
Location: 22329 - 23156 (+)
Gene ID: HRGMv2_0897_17_16
Type: CAZyme
Location: 23288 - 24214 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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