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Cluster: HRGMv2_0896_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0896_19 HRGMv2_0896_19_18 16590 17516 - CE7
TC HRGMv2_0896_19 HRGMv2_0896_19_19 17648 18475 - 3.A.1.5.27
TC HRGMv2_0896_19 HRGMv2_0896_19_20 18476 20491 - 3.A.1.5.25
TC HRGMv2_0896_19 HRGMv2_0896_19_21 20495 21451 - 3.A.1.5.38
TC HRGMv2_0896_19 HRGMv2_0896_19_22 21607 23220 - 3.A.1.5.27
pfam HRGMv2_0896_19 HRGMv2_0896_19_23 23584 25524 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0896_19 HRGMv2_0896_19_24 25531 27213 - 2.A.66.4.4
Gene ID: HRGMv2_0896_19_18
Type: CAZyme
Location: 16590 - 17516 (-)
Gene ID: HRGMv2_0896_19_19
Type: TC
Location: 17648 - 18475 (-)
Gene ID: HRGMv2_0896_19_20
Type: TC
Location: 18476 - 20491 (-)
Gene ID: HRGMv2_0896_19_21
Type: TC
Location: 20495 - 21451 (-)
Gene ID: HRGMv2_0896_19_22
Type: TC
Location: 21607 - 23220 (-)
Gene ID: HRGMv2_0896_19_23
Type: pfam
Location: 23584 - 25524 (-)
Gene ID: HRGMv2_0896_19_24
Type: TC
Location: 25531 - 27213 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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