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Cluster: HRGMv2_0896_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0896_13 HRGMv2_0896_13_3 2625 5075 - 4.A.1.1.8
TF HRGMv2_0896_13 HRGMv2_0896_13_4 5303 6022 + GntR
TC HRGMv2_0896_13 HRGMv2_0896_13_5 6329 7645 + 3.A.1.1.45
TC HRGMv2_0896_13 HRGMv2_0896_13_6 7733 8587 + 3.A.1.1.45
TC HRGMv2_0896_13 HRGMv2_0896_13_7 8587 9426 + 3.A.1.1.45
TC HRGMv2_0896_13 HRGMv2_0896_13_8 9495 10694 + 3.A.1.1.22
CAZyme HRGMv2_0896_13 HRGMv2_0896_13_9 11072 13339 - GT35
CAZyme HRGMv2_0896_13 HRGMv2_0896_13_10 13468 14973 - GH77
Gene ID: HRGMv2_0896_13_3
Type: TC
Location: 2625 - 5075 (-)
Gene ID: HRGMv2_0896_13_4
Type: TF
Location: 5303 - 6022 (+)
Gene ID: HRGMv2_0896_13_5
Type: TC
Location: 6329 - 7645 (+)
Gene ID: HRGMv2_0896_13_6
Type: TC
Location: 7733 - 8587 (+)
Gene ID: HRGMv2_0896_13_7
Type: TC
Location: 8587 - 9426 (+)
Gene ID: HRGMv2_0896_13_8
Type: TC
Location: 9495 - 10694 (+)
Gene ID: HRGMv2_0896_13_9
Type: CAZyme
Location: 11072 - 13339 (-)
Gene ID: HRGMv2_0896_13_10
Type: CAZyme
Location: 13468 - 14973 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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