Cluster: HRGMv2_0896_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0896
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0896_79 | HRGMv2_0896_79_2 | 1430 | 2812 | + | GH32 |
| TC | HRGMv2_0896_79 | HRGMv2_0896_79_3 | 2858 | 4309 | + | 4.A.1.2.8 |
| CAZyme | HRGMv2_0896_79 | HRGMv2_0896_79_4 | 4411 | 5265 | + | GH32 |
Gene ID: HRGMv2_0896_79_2
Type: CAZyme
Location: 1430 - 2812 (+)
Type: CAZyme
Location: 1430 - 2812 (+)
Gene ID: HRGMv2_0896_79_3
Type: TC
Location: 2858 - 4309 (+)
Type: TC
Location: 2858 - 4309 (+)
Gene ID: HRGMv2_0896_79_4
Type: CAZyme
Location: 4411 - 5265 (+)
Type: CAZyme
Location: 4411 - 5265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AK
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.