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Cluster: HRGMv2_0896_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0896_55 HRGMv2_0896_55_3 2427 2870 + 4.A.6.1.16
pfam HRGMv2_0896_55 HRGMv2_0896_55_4 2870 3151 + YajC
TC HRGMv2_0896_55 HRGMv2_0896_55_5 3188 3670 + 4.A.6.1.4
TC HRGMv2_0896_55 HRGMv2_0896_55_6 3761 4561 + 4.A.6.1.4
TC HRGMv2_0896_55 HRGMv2_0896_55_7 4551 5633 + 4.A.6.1.4
TF HRGMv2_0896_55 HRGMv2_0896_55_8 5819 6550 + GntR
STP HRGMv2_0896_55 HRGMv2_0896_55_9 6665 7831 + SIS | SIS
CAZyme HRGMv2_0896_55 HRGMv2_0896_55_10 7952 9121 + CE9
Gene ID: HRGMv2_0896_55_3
Type: TC
Location: 2427 - 2870 (+)
Gene ID: HRGMv2_0896_55_4
Type: pfam
Location: 2870 - 3151 (+)
Gene ID: HRGMv2_0896_55_5
Type: TC
Location: 3188 - 3670 (+)
Gene ID: HRGMv2_0896_55_6
Type: TC
Location: 3761 - 4561 (+)
Gene ID: HRGMv2_0896_55_7
Type: TC
Location: 4551 - 5633 (+)
Gene ID: HRGMv2_0896_55_8
Type: TF
Location: 5819 - 6550 (+)
Gene ID: HRGMv2_0896_55_9
Type: STP
Location: 6665 - 7831 (+)
Gene ID: HRGMv2_0896_55_10
Type: CAZyme
Location: 7952 - 9121 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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