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Cluster: HRGMv2_0895_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0895_5 HRGMv2_0895_5_99 101984 102910 - CE7
TC HRGMv2_0895_5 HRGMv2_0895_5_100 103042 103869 - 3.A.1.5.27
TC HRGMv2_0895_5 HRGMv2_0895_5_101 103870 105885 - 3.A.1.5.25
TC HRGMv2_0895_5 HRGMv2_0895_5_102 105889 106845 - 3.A.1.5.38
TC HRGMv2_0895_5 HRGMv2_0895_5_103 107003 108616 - 3.A.1.5.27
pfam HRGMv2_0895_5 HRGMv2_0895_5_104 108982 110922 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0895_5 HRGMv2_0895_5_105 110929 112611 - 2.A.66.4.4
Gene ID: HRGMv2_0895_5_99
Type: CAZyme
Location: 101984 - 102910 (-)
Gene ID: HRGMv2_0895_5_100
Type: TC
Location: 103042 - 103869 (-)
Gene ID: HRGMv2_0895_5_101
Type: TC
Location: 103870 - 105885 (-)
Gene ID: HRGMv2_0895_5_102
Type: TC
Location: 105889 - 106845 (-)
Gene ID: HRGMv2_0895_5_103
Type: TC
Location: 107003 - 108616 (-)
Gene ID: HRGMv2_0895_5_104
Type: pfam
Location: 108982 - 110922 (-)
Gene ID: HRGMv2_0895_5_105
Type: TC
Location: 110929 - 112611 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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