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Cluster: HRGMv2_0895_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0895_29 HRGMv2_0895_29_3 1407 2156 + 9.B.18.1.2
CAZyme HRGMv2_0895_29 HRGMv2_0895_29_4 2226 3260 + GT4
pfam HRGMv2_0895_29 HRGMv2_0895_29_5 3270 4457 + PS_pyruv_trans
STP HRGMv2_0895_29 HRGMv2_0895_29_6 4466 5710 + Fer4
CAZyme HRGMv2_0895_29 HRGMv2_0895_29_7 5733 6485 + GT32
CAZyme HRGMv2_0895_29 HRGMv2_0895_29_8 6485 7522 + GT4
CAZyme HRGMv2_0895_29 HRGMv2_0895_29_9 7519 8583 + GT2
Gene ID: HRGMv2_0895_29_3
Type: TC
Location: 1407 - 2156 (+)
Gene ID: HRGMv2_0895_29_4
Type: CAZyme
Location: 2226 - 3260 (+)
Gene ID: HRGMv2_0895_29_5
Type: pfam
Location: 3270 - 4457 (+)
Gene ID: HRGMv2_0895_29_6
Type: STP
Location: 4466 - 5710 (+)
Gene ID: HRGMv2_0895_29_7
Type: CAZyme
Location: 5733 - 6485 (+)
Gene ID: HRGMv2_0895_29_8
Type: CAZyme
Location: 6485 - 7522 (+)
Gene ID: HRGMv2_0895_29_9
Type: CAZyme
Location: 7519 - 8583 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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