dbCAN Logo

Cluster: HRGMv2_0895_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0895_24 HRGMv2_0895_24_5 8200 10668 - 4.A.1.1.8
TF HRGMv2_0895_24 HRGMv2_0895_24_6 10878 11597 + GntR
TC HRGMv2_0895_24 HRGMv2_0895_24_7 11904 13220 + 3.A.1.1.45
TC HRGMv2_0895_24 HRGMv2_0895_24_8 13308 14162 + 3.A.1.1.45
TC HRGMv2_0895_24 HRGMv2_0895_24_9 14162 15001 + 3.A.1.1.45
TC HRGMv2_0895_24 HRGMv2_0895_24_10 15070 16269 + 3.A.1.1.22
CAZyme HRGMv2_0895_24 HRGMv2_0895_24_11 16725 18992 - GT35
CAZyme HRGMv2_0895_24 HRGMv2_0895_24_12 19121 20626 - GH77
Gene ID: HRGMv2_0895_24_5
Type: TC
Location: 8200 - 10668 (-)
Gene ID: HRGMv2_0895_24_6
Type: TF
Location: 10878 - 11597 (+)
Gene ID: HRGMv2_0895_24_7
Type: TC
Location: 11904 - 13220 (+)
Gene ID: HRGMv2_0895_24_8
Type: TC
Location: 13308 - 14162 (+)
Gene ID: HRGMv2_0895_24_9
Type: TC
Location: 14162 - 15001 (+)
Gene ID: HRGMv2_0895_24_10
Type: TC
Location: 15070 - 16269 (+)
Gene ID: HRGMv2_0895_24_11
Type: CAZyme
Location: 16725 - 18992 (-)
Gene ID: HRGMv2_0895_24_12
Type: CAZyme
Location: 19121 - 20626 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List