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Cluster: HRGMv2_0895_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0895_21 HRGMv2_0895_21_13 17792 19168 - GH13_20
TC HRGMv2_0895_21 HRGMv2_0895_21_14 19322 20518 - 2.A.1.2.18
TC HRGMv2_0895_21 HRGMv2_0895_21_15 20643 23003 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0895_21 HRGMv2_0895_21_16 23125 23445 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0895_21 HRGMv2_0895_21_17 23493 24392 - S09.UPW
TC HRGMv2_0895_21 HRGMv2_0895_21_18 24636 25199 + 4.A.1.2.6
pfam HRGMv2_0895_21 HRGMv2_0895_21_19 25380 26783 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0895_21 HRGMv2_0895_21_20 27042 27827 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0895_21 HRGMv2_0895_21_21 27988 28968 + 3.A.1.34.1
TC HRGMv2_0895_21 HRGMv2_0895_21_22 29173 30096 + 3.A.1.34.1
TC HRGMv2_0895_21 HRGMv2_0895_21_23 30089 30883 + 3.A.1.34.1
Gene ID: HRGMv2_0895_21_13
Type: CAZyme
Location: 17792 - 19168 (-)
Gene ID: HRGMv2_0895_21_14
Type: TC
Location: 19322 - 20518 (-)
Gene ID: HRGMv2_0895_21_15
Type: TC
Location: 20643 - 23003 (-)
Gene ID: HRGMv2_0895_21_16
Type:
Location: 23125 - 23445 (-)
Gene ID: HRGMv2_0895_21_17
Type: peptidase
Location: 23493 - 24392 (-)
Gene ID: HRGMv2_0895_21_18
Type: TC
Location: 24636 - 25199 (+)
Gene ID: HRGMv2_0895_21_19
Type: pfam
Location: 25380 - 26783 (+)
Gene ID: HRGMv2_0895_21_20
Type:
Location: 27042 - 27827 (+)
Gene ID: HRGMv2_0895_21_21
Type: TC
Location: 27988 - 28968 (+)
Gene ID: HRGMv2_0895_21_22
Type: TC
Location: 29173 - 30096 (+)
Gene ID: HRGMv2_0895_21_23
Type: TC
Location: 30089 - 30883 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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