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Cluster: HRGMv2_0893_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0893_19 HRGMv2_0893_19_14 14397 15902 + GH77
CAZyme HRGMv2_0893_19 HRGMv2_0893_19_15 16032 18299 + GT35
TC HRGMv2_0893_19 HRGMv2_0893_19_16 18755 19954 - 3.A.1.1.22
TC HRGMv2_0893_19 HRGMv2_0893_19_17 20023 20862 - 3.A.1.1.45
TC HRGMv2_0893_19 HRGMv2_0893_19_18 20862 21716 - 3.A.1.1.45
TC HRGMv2_0893_19 HRGMv2_0893_19_19 21804 23120 - 3.A.1.1.45
TF HRGMv2_0893_19 HRGMv2_0893_19_20 23427 24146 - GntR
NULL(UNKNOWN) HRGMv2_0893_19 HRGMv2_0893_19_21 24230 24349 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0893_19 HRGMv2_0893_19_22 24371 26821 + 4.A.1.1.8
Gene ID: HRGMv2_0893_19_14
Type: CAZyme
Location: 14397 - 15902 (+)
Gene ID: HRGMv2_0893_19_15
Type: CAZyme
Location: 16032 - 18299 (+)
Gene ID: HRGMv2_0893_19_16
Type: TC
Location: 18755 - 19954 (-)
Gene ID: HRGMv2_0893_19_17
Type: TC
Location: 20023 - 20862 (-)
Gene ID: HRGMv2_0893_19_18
Type: TC
Location: 20862 - 21716 (-)
Gene ID: HRGMv2_0893_19_19
Type: TC
Location: 21804 - 23120 (-)
Gene ID: HRGMv2_0893_19_20
Type: TF
Location: 23427 - 24146 (-)
Gene ID: HRGMv2_0893_19_21
Type:
Location: 24230 - 24349 (-)
Gene ID: HRGMv2_0893_19_22
Type: TC
Location: 24371 - 26821 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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