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Cluster: HRGMv2_0893_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0893_17 HRGMv2_0893_17_43 45439 46839 + GH1
TC HRGMv2_0893_17 HRGMv2_0893_17_44 46960 48303 + 4.A.3.2.2
TC HRGMv2_0893_17 HRGMv2_0893_17_45 48467 48769 + 4.A.3.2.9
TC HRGMv2_0893_17 HRGMv2_0893_17_46 48779 49111 + 4.A.3.2.3
STP HRGMv2_0893_17 HRGMv2_0893_17_47 49353 50306 + Glucokinase
pfam HRGMv2_0893_17 HRGMv2_0893_17_48 50475 51398 + DHH | DHHA2
TC HRGMv2_0893_17 HRGMv2_0893_17_49 51667 53025 + 2.A.33.1.1
Gene ID: HRGMv2_0893_17_43
Type: CAZyme
Location: 45439 - 46839 (+)
Gene ID: HRGMv2_0893_17_44
Type: TC
Location: 46960 - 48303 (+)
Gene ID: HRGMv2_0893_17_45
Type: TC
Location: 48467 - 48769 (+)
Gene ID: HRGMv2_0893_17_46
Type: TC
Location: 48779 - 49111 (+)
Gene ID: HRGMv2_0893_17_47
Type: STP
Location: 49353 - 50306 (+)
Gene ID: HRGMv2_0893_17_48
Type: pfam
Location: 50475 - 51398 (+)
Gene ID: HRGMv2_0893_17_49
Type: TC
Location: 51667 - 53025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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