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Cluster: HRGMv2_0892_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0892_10 HRGMv2_0892_10_26 25156 25638 + 4.A.6.1.5
sulfatase HRGMv2_0892_10 HRGMv2_0892_10_27 25965 27017 - S1_4
TF HRGMv2_0892_10 HRGMv2_0892_10_28 27224 27988 + HTH_DeoR
CAZyme HRGMv2_0892_10 HRGMv2_0892_10_29 28185 29606 - GH1
TC HRGMv2_0892_10 HRGMv2_0892_10_30 29682 31460 - 4.A.3.1.1
TF HRGMv2_0892_10 HRGMv2_0892_10_31 31736 32746 + LacI
CAZyme HRGMv2_0892_10 HRGMv2_0892_10_32 33021 34460 - GH1
TC HRGMv2_0892_10 HRGMv2_0892_10_33 34527 36302 - 4.A.3.1.1
TF HRGMv2_0892_10 HRGMv2_0892_10_34 36660 37664 + LacI
TC HRGMv2_0892_10 HRGMv2_0892_10_35 37879 38217 + 4.A.3.1.2
Gene ID: HRGMv2_0892_10_26
Type: TC
Location: 25156 - 25638 (+)
Gene ID: HRGMv2_0892_10_27
Type: sulfatase
Location: 25965 - 27017 (-)
Gene ID: HRGMv2_0892_10_28
Type: TF
Location: 27224 - 27988 (+)
Gene ID: HRGMv2_0892_10_29
Type: CAZyme
Location: 28185 - 29606 (-)
Gene ID: HRGMv2_0892_10_30
Type: TC
Location: 29682 - 31460 (-)
Gene ID: HRGMv2_0892_10_31
Type: TF
Location: 31736 - 32746 (+)
Gene ID: HRGMv2_0892_10_32
Type: CAZyme
Location: 33021 - 34460 (-)
Gene ID: HRGMv2_0892_10_33
Type: TC
Location: 34527 - 36302 (-)
Gene ID: HRGMv2_0892_10_34
Type: TF
Location: 36660 - 37664 (+)
Gene ID: HRGMv2_0892_10_35
Type: TC
Location: 37879 - 38217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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