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Cluster: HRGMv2_0892_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0892_10 HRGMv2_0892_10_14 14660 15103 + 4.A.6.1.16
pfam HRGMv2_0892_10 HRGMv2_0892_10_15 15103 15384 + YajC
TC HRGMv2_0892_10 HRGMv2_0892_10_16 15421 15903 + 4.A.6.1.4
TC HRGMv2_0892_10 HRGMv2_0892_10_17 15994 16794 + 4.A.6.1.4
TC HRGMv2_0892_10 HRGMv2_0892_10_18 16784 17866 + 4.A.6.1.4
TF HRGMv2_0892_10 HRGMv2_0892_10_19 18051 18782 + GntR
STP HRGMv2_0892_10 HRGMv2_0892_10_20 18897 20063 + SIS | SIS
CAZyme HRGMv2_0892_10 HRGMv2_0892_10_21 20181 21350 + CE9
Gene ID: HRGMv2_0892_10_14
Type: TC
Location: 14660 - 15103 (+)
Gene ID: HRGMv2_0892_10_15
Type: pfam
Location: 15103 - 15384 (+)
Gene ID: HRGMv2_0892_10_16
Type: TC
Location: 15421 - 15903 (+)
Gene ID: HRGMv2_0892_10_17
Type: TC
Location: 15994 - 16794 (+)
Gene ID: HRGMv2_0892_10_18
Type: TC
Location: 16784 - 17866 (+)
Gene ID: HRGMv2_0892_10_19
Type: TF
Location: 18051 - 18782 (+)
Gene ID: HRGMv2_0892_10_20
Type: STP
Location: 18897 - 20063 (+)
Gene ID: HRGMv2_0892_10_21
Type: CAZyme
Location: 20181 - 21350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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