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Cluster: HRGMv2_0892_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0892_3 HRGMv2_0892_3_6 5577 7253 + 3.A.1.5.35
TC HRGMv2_0892_3 HRGMv2_0892_3_7 7410 8447 + 3.A.1.5.37
TC HRGMv2_0892_3 HRGMv2_0892_3_8 8462 9397 + 3.A.1.5.11
TC HRGMv2_0892_3 HRGMv2_0892_3_9 9400 10491 + 3.A.1.5.34
TC HRGMv2_0892_3 HRGMv2_0892_3_10 10492 11520 + 3.A.1.5.36
STP HRGMv2_0892_3 HRGMv2_0892_3_11 12265 14610 + GAF | SpoIIE
STP HRGMv2_0892_3 HRGMv2_0892_3_12 14689 15435 + STAS
CAZyme HRGMv2_0892_3 HRGMv2_0892_3_13 16180 17913 + GH13_30
Gene ID: HRGMv2_0892_3_6
Type: TC
Location: 5577 - 7253 (+)
Gene ID: HRGMv2_0892_3_7
Type: TC
Location: 7410 - 8447 (+)
Gene ID: HRGMv2_0892_3_8
Type: TC
Location: 8462 - 9397 (+)
Gene ID: HRGMv2_0892_3_9
Type: TC
Location: 9400 - 10491 (+)
Gene ID: HRGMv2_0892_3_10
Type: TC
Location: 10492 - 11520 (+)
Gene ID: HRGMv2_0892_3_11
Type: STP
Location: 12265 - 14610 (+)
Gene ID: HRGMv2_0892_3_12
Type: STP
Location: 14689 - 15435 (+)
Gene ID: HRGMv2_0892_3_13
Type: CAZyme
Location: 16180 - 17913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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