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Cluster: HRGMv2_0892_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0892_1 HRGMv2_0892_1_125 130389 131765 - GH13_20
TC HRGMv2_0892_1 HRGMv2_0892_1_126 131918 133114 - 2.A.1.2.18
TC HRGMv2_0892_1 HRGMv2_0892_1_127 133237 135597 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0892_1 HRGMv2_0892_1_128 135719 136039 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0892_1 HRGMv2_0892_1_129 136087 136986 - S09.UPW
TC HRGMv2_0892_1 HRGMv2_0892_1_130 137229 137792 + 4.A.1.2.6
pfam HRGMv2_0892_1 HRGMv2_0892_1_131 137973 139376 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0892_1 HRGMv2_0892_1_132 139626 140411 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0892_1 HRGMv2_0892_1_133 140572 141552 + 3.A.1.34.1
TC HRGMv2_0892_1 HRGMv2_0892_1_134 141756 142679 + 3.A.1.34.1
TC HRGMv2_0892_1 HRGMv2_0892_1_135 142672 143466 + 3.A.1.34.1
Gene ID: HRGMv2_0892_1_125
Type: CAZyme
Location: 130389 - 131765 (-)
Gene ID: HRGMv2_0892_1_126
Type: TC
Location: 131918 - 133114 (-)
Gene ID: HRGMv2_0892_1_127
Type: TC
Location: 133237 - 135597 (-)
Gene ID: HRGMv2_0892_1_128
Type:
Location: 135719 - 136039 (-)
Gene ID: HRGMv2_0892_1_129
Type: peptidase
Location: 136087 - 136986 (-)
Gene ID: HRGMv2_0892_1_130
Type: TC
Location: 137229 - 137792 (+)
Gene ID: HRGMv2_0892_1_131
Type: pfam
Location: 137973 - 139376 (+)
Gene ID: HRGMv2_0892_1_132
Type:
Location: 139626 - 140411 (+)
Gene ID: HRGMv2_0892_1_133
Type: TC
Location: 140572 - 141552 (+)
Gene ID: HRGMv2_0892_1_134
Type: TC
Location: 141756 - 142679 (+)
Gene ID: HRGMv2_0892_1_135
Type: TC
Location: 142672 - 143466 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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