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Cluster: HRGMv2_0892_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0892_27 HRGMv2_0892_27_7 5811 6737 - CE7
TC HRGMv2_0892_27 HRGMv2_0892_27_8 6869 7696 - 3.A.1.5.27
TC HRGMv2_0892_27 HRGMv2_0892_27_9 7697 9712 - 3.A.1.5.25
TC HRGMv2_0892_27 HRGMv2_0892_27_10 9716 10672 - 3.A.1.5.38
TC HRGMv2_0892_27 HRGMv2_0892_27_11 10830 12443 - 3.A.1.5.27
pfam HRGMv2_0892_27 HRGMv2_0892_27_12 12808 14748 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0892_27 HRGMv2_0892_27_13 14755 16437 - 2.A.66.4.4
Gene ID: HRGMv2_0892_27_7
Type: CAZyme
Location: 5811 - 6737 (-)
Gene ID: HRGMv2_0892_27_8
Type: TC
Location: 6869 - 7696 (-)
Gene ID: HRGMv2_0892_27_9
Type: TC
Location: 7697 - 9712 (-)
Gene ID: HRGMv2_0892_27_10
Type: TC
Location: 9716 - 10672 (-)
Gene ID: HRGMv2_0892_27_11
Type: TC
Location: 10830 - 12443 (-)
Gene ID: HRGMv2_0892_27_12
Type: pfam
Location: 12808 - 14748 (-)
Gene ID: HRGMv2_0892_27_13
Type: TC
Location: 14755 - 16437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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