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Cluster: HRGMv2_0892_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0892_14 HRGMv2_0892_14_37 43669 44757 - 3.D.1.4.2
pfam HRGMv2_0892_14 HRGMv2_0892_14_38 44763 45479 - Complex1_30kDa
TC HRGMv2_0892_14 HRGMv2_0892_14_39 45479 46054 - 3.D.1.4.2
TC HRGMv2_0892_14 HRGMv2_0892_14_40 46067 48949 - 3.D.1.4.2
TF HRGMv2_0892_14 HRGMv2_0892_14_41 49206 49601 - 0039939
STP HRGMv2_0892_14 HRGMv2_0892_14_42 50051 52081 - Pyr_redox_2
TC HRGMv2_0892_14 HRGMv2_0892_14_43 53036 54598 + 4.A.1.1.7
NULL(UNKNOWN) HRGMv2_0892_14 HRGMv2_0892_14_44 54644 54913 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0892_14 HRGMv2_0892_14_45 54933 56261 + GH4
Gene ID: HRGMv2_0892_14_37
Type: TC
Location: 43669 - 44757 (-)
Gene ID: HRGMv2_0892_14_38
Type: pfam
Location: 44763 - 45479 (-)
Gene ID: HRGMv2_0892_14_39
Type: TC
Location: 45479 - 46054 (-)
Gene ID: HRGMv2_0892_14_40
Type: TC
Location: 46067 - 48949 (-)
Gene ID: HRGMv2_0892_14_41
Type: TF
Location: 49206 - 49601 (-)
Gene ID: HRGMv2_0892_14_42
Type: STP
Location: 50051 - 52081 (-)
Gene ID: HRGMv2_0892_14_43
Type: TC
Location: 53036 - 54598 (+)
Gene ID: HRGMv2_0892_14_44
Type:
Location: 54644 - 54913 (+)
Gene ID: HRGMv2_0892_14_45
Type: CAZyme
Location: 54933 - 56261 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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