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Cluster: HRGMv2_0891_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0891_3 HRGMv2_0891_3_50 48893 50269 - GH13_20
TC HRGMv2_0891_3 HRGMv2_0891_3_51 50349 51545 - 2.A.1.2.18
TC HRGMv2_0891_3 HRGMv2_0891_3_52 51670 54030 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0891_3 HRGMv2_0891_3_53 54152 54472 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0891_3 HRGMv2_0891_3_54 54520 55419 - S09.UPW
TC HRGMv2_0891_3 HRGMv2_0891_3_55 55663 56226 + 4.A.1.2.6
pfam HRGMv2_0891_3 HRGMv2_0891_3_56 56408 57811 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0891_3 HRGMv2_0891_3_57 58061 58846 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0891_3 HRGMv2_0891_3_58 59006 59986 + 3.A.1.34.1
TC HRGMv2_0891_3 HRGMv2_0891_3_59 60190 61113 + 3.A.1.34.1
TC HRGMv2_0891_3 HRGMv2_0891_3_60 61106 61900 + 3.A.1.34.1
Gene ID: HRGMv2_0891_3_50
Type: CAZyme
Location: 48893 - 50269 (-)
Gene ID: HRGMv2_0891_3_51
Type: TC
Location: 50349 - 51545 (-)
Gene ID: HRGMv2_0891_3_52
Type: TC
Location: 51670 - 54030 (-)
Gene ID: HRGMv2_0891_3_53
Type:
Location: 54152 - 54472 (-)
Gene ID: HRGMv2_0891_3_54
Type: peptidase
Location: 54520 - 55419 (-)
Gene ID: HRGMv2_0891_3_55
Type: TC
Location: 55663 - 56226 (+)
Gene ID: HRGMv2_0891_3_56
Type: pfam
Location: 56408 - 57811 (+)
Gene ID: HRGMv2_0891_3_57
Type:
Location: 58061 - 58846 (+)
Gene ID: HRGMv2_0891_3_58
Type: TC
Location: 59006 - 59986 (+)
Gene ID: HRGMv2_0891_3_59
Type: TC
Location: 60190 - 61113 (+)
Gene ID: HRGMv2_0891_3_60
Type: TC
Location: 61106 - 61900 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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