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Cluster: HRGMv2_0891_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0891_19 HRGMv2_0891_19_9 8759 10264 + GH77
CAZyme HRGMv2_0891_19 HRGMv2_0891_19_10 10393 12660 + GT35
TC HRGMv2_0891_19 HRGMv2_0891_19_11 13116 14315 - 3.A.1.1.22
TC HRGMv2_0891_19 HRGMv2_0891_19_12 14384 15223 - 3.A.1.1.45
TC HRGMv2_0891_19 HRGMv2_0891_19_13 15223 16077 - 3.A.1.1.45
TC HRGMv2_0891_19 HRGMv2_0891_19_14 16165 17481 - 3.A.1.1.45
TF HRGMv2_0891_19 HRGMv2_0891_19_15 17788 18507 - GntR
TC HRGMv2_0891_19 HRGMv2_0891_19_16 18717 21185 + 4.A.1.1.8
Gene ID: HRGMv2_0891_19_9
Type: CAZyme
Location: 8759 - 10264 (+)
Gene ID: HRGMv2_0891_19_10
Type: CAZyme
Location: 10393 - 12660 (+)
Gene ID: HRGMv2_0891_19_11
Type: TC
Location: 13116 - 14315 (-)
Gene ID: HRGMv2_0891_19_12
Type: TC
Location: 14384 - 15223 (-)
Gene ID: HRGMv2_0891_19_13
Type: TC
Location: 15223 - 16077 (-)
Gene ID: HRGMv2_0891_19_14
Type: TC
Location: 16165 - 17481 (-)
Gene ID: HRGMv2_0891_19_15
Type: TF
Location: 17788 - 18507 (-)
Gene ID: HRGMv2_0891_19_16
Type: TC
Location: 18717 - 21185 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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