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Cluster: HRGMv2_0891_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0891_11 HRGMv2_0891_11_44 40932 42332 + GH1
TC HRGMv2_0891_11 HRGMv2_0891_11_45 42453 43796 + 4.A.3.2.2
TC HRGMv2_0891_11 HRGMv2_0891_11_46 43957 44259 + 4.A.3.2.9
TC HRGMv2_0891_11 HRGMv2_0891_11_47 44269 44601 + 4.A.3.2.3
STP HRGMv2_0891_11 HRGMv2_0891_11_48 44843 45796 + Glucokinase
pfam HRGMv2_0891_11 HRGMv2_0891_11_49 45963 46886 + DHH | DHHA2
TC HRGMv2_0891_11 HRGMv2_0891_11_50 47150 48508 + 2.A.33.1.1
Gene ID: HRGMv2_0891_11_44
Type: CAZyme
Location: 40932 - 42332 (+)
Gene ID: HRGMv2_0891_11_45
Type: TC
Location: 42453 - 43796 (+)
Gene ID: HRGMv2_0891_11_46
Type: TC
Location: 43957 - 44259 (+)
Gene ID: HRGMv2_0891_11_47
Type: TC
Location: 44269 - 44601 (+)
Gene ID: HRGMv2_0891_11_48
Type: STP
Location: 44843 - 45796 (+)
Gene ID: HRGMv2_0891_11_49
Type: pfam
Location: 45963 - 46886 (+)
Gene ID: HRGMv2_0891_11_50
Type: TC
Location: 47150 - 48508 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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