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Cluster: HRGMv2_0891_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0891_10 HRGMv2_0891_10_28 35502 37178 + 3.A.1.5.35
TC HRGMv2_0891_10 HRGMv2_0891_10_29 37336 38373 + 3.A.1.5.37
TC HRGMv2_0891_10 HRGMv2_0891_10_30 38388 39323 + 3.A.1.5.11
TC HRGMv2_0891_10 HRGMv2_0891_10_31 39326 40417 + 3.A.1.5.34
TC HRGMv2_0891_10 HRGMv2_0891_10_32 40418 41446 + 3.A.1.5.36
STP HRGMv2_0891_10 HRGMv2_0891_10_33 42186 44531 + GAF | SpoIIE
STP HRGMv2_0891_10 HRGMv2_0891_10_34 44610 45356 + STAS
CAZyme HRGMv2_0891_10 HRGMv2_0891_10_35 45468 47675 + GH13_30
Gene ID: HRGMv2_0891_10_28
Type: TC
Location: 35502 - 37178 (+)
Gene ID: HRGMv2_0891_10_29
Type: TC
Location: 37336 - 38373 (+)
Gene ID: HRGMv2_0891_10_30
Type: TC
Location: 38388 - 39323 (+)
Gene ID: HRGMv2_0891_10_31
Type: TC
Location: 39326 - 40417 (+)
Gene ID: HRGMv2_0891_10_32
Type: TC
Location: 40418 - 41446 (+)
Gene ID: HRGMv2_0891_10_33
Type: STP
Location: 42186 - 44531 (+)
Gene ID: HRGMv2_0891_10_34
Type: STP
Location: 44610 - 45356 (+)
Gene ID: HRGMv2_0891_10_35
Type: CAZyme
Location: 45468 - 47675 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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