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Cluster: HRGMv2_0889_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0889_13 HRGMv2_0889_13_10 9015 10520 + GH77
CAZyme HRGMv2_0889_13 HRGMv2_0889_13_11 10649 12916 + GT35
TC HRGMv2_0889_13 HRGMv2_0889_13_12 13374 14573 - 3.A.1.1.22
TC HRGMv2_0889_13 HRGMv2_0889_13_13 14642 15481 - 3.A.1.1.45
TC HRGMv2_0889_13 HRGMv2_0889_13_14 15481 16335 - 3.A.1.1.45
TC HRGMv2_0889_13 HRGMv2_0889_13_15 16423 17739 - 3.A.1.1.45
TF HRGMv2_0889_13 HRGMv2_0889_13_16 18046 18765 - GntR
TC HRGMv2_0889_13 HRGMv2_0889_13_17 18993 21443 + 4.A.1.1.8
Gene ID: HRGMv2_0889_13_10
Type: CAZyme
Location: 9015 - 10520 (+)
Gene ID: HRGMv2_0889_13_11
Type: CAZyme
Location: 10649 - 12916 (+)
Gene ID: HRGMv2_0889_13_12
Type: TC
Location: 13374 - 14573 (-)
Gene ID: HRGMv2_0889_13_13
Type: TC
Location: 14642 - 15481 (-)
Gene ID: HRGMv2_0889_13_14
Type: TC
Location: 15481 - 16335 (-)
Gene ID: HRGMv2_0889_13_15
Type: TC
Location: 16423 - 17739 (-)
Gene ID: HRGMv2_0889_13_16
Type: TF
Location: 18046 - 18765 (-)
Gene ID: HRGMv2_0889_13_17
Type: TC
Location: 18993 - 21443 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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