dbCAN Logo

Cluster: HRGMv2_0889_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0889_36 HRGMv2_0889_36_10 13640 15016 - GH13_20
TC HRGMv2_0889_36 HRGMv2_0889_36_11 15170 16366 - 2.A.1.2.18
TC HRGMv2_0889_36 HRGMv2_0889_36_12 16488 18848 - 9.A.8.1.6
peptidase HRGMv2_0889_36 HRGMv2_0889_36_13 19320 20219 - S09.UPW
TC HRGMv2_0889_36 HRGMv2_0889_36_14 20463 21026 + 4.A.1.2.6
pfam HRGMv2_0889_36 HRGMv2_0889_36_15 21208 22611 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0889_36 HRGMv2_0889_36_16 22870 23658 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0889_36 HRGMv2_0889_36_17 23818 24798 + 3.A.1.34.1
TC HRGMv2_0889_36 HRGMv2_0889_36_18 25002 25925 + 3.A.1.34.1
TC HRGMv2_0889_36 HRGMv2_0889_36_19 25918 26712 + 3.A.1.34.1
Gene ID: HRGMv2_0889_36_10
Type: CAZyme
Location: 13640 - 15016 (-)
Gene ID: HRGMv2_0889_36_11
Type: TC
Location: 15170 - 16366 (-)
Gene ID: HRGMv2_0889_36_12
Type: TC
Location: 16488 - 18848 (-)
Gene ID: HRGMv2_0889_36_13
Type: peptidase
Location: 19320 - 20219 (-)
Gene ID: HRGMv2_0889_36_14
Type: TC
Location: 20463 - 21026 (+)
Gene ID: HRGMv2_0889_36_15
Type: pfam
Location: 21208 - 22611 (+)
Gene ID: HRGMv2_0889_36_16
Type:
Location: 22870 - 23658 (+)
Gene ID: HRGMv2_0889_36_17
Type: TC
Location: 23818 - 24798 (+)
Gene ID: HRGMv2_0889_36_18
Type: TC
Location: 25002 - 25925 (+)
Gene ID: HRGMv2_0889_36_19
Type: TC
Location: 25918 - 26712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List