Cluster: HRGMv2_0889_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0889
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0889_26 | HRGMv2_0889_26_31 | 33903 | 35345 | - | GH32 |
| TC | HRGMv2_0889_26 | HRGMv2_0889_26_32 | 35447 | 36898 | - | 4.A.1.2.8 |
| CAZyme | HRGMv2_0889_26 | HRGMv2_0889_26_33 | 36944 | 38326 | - | GH32 |
Gene ID: HRGMv2_0889_26_31
Type: CAZyme
Location: 33903 - 35345 (-)
Type: CAZyme
Location: 33903 - 35345 (-)
Gene ID: HRGMv2_0889_26_32
Type: TC
Location: 35447 - 36898 (-)
Type: TC
Location: 35447 - 36898 (-)
Gene ID: HRGMv2_0889_26_33
Type: CAZyme
Location: 36944 - 38326 (-)
Type: CAZyme
Location: 36944 - 38326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_G
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.