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Cluster: HRGMv2_0889_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0889_17 HRGMv2_0889_17_124 135684 136610 - CE7
TC HRGMv2_0889_17 HRGMv2_0889_17_125 136742 137569 - 3.A.1.5.27
TC HRGMv2_0889_17 HRGMv2_0889_17_126 137570 139585 - 3.A.1.5.25
TC HRGMv2_0889_17 HRGMv2_0889_17_127 139589 140545 - 3.A.1.5.38
TC HRGMv2_0889_17 HRGMv2_0889_17_128 140701 142314 - 3.A.1.5.27
pfam HRGMv2_0889_17 HRGMv2_0889_17_129 142680 144620 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0889_17 HRGMv2_0889_17_130 144627 146309 - 2.A.66.4.4
Gene ID: HRGMv2_0889_17_124
Type: CAZyme
Location: 135684 - 136610 (-)
Gene ID: HRGMv2_0889_17_125
Type: TC
Location: 136742 - 137569 (-)
Gene ID: HRGMv2_0889_17_126
Type: TC
Location: 137570 - 139585 (-)
Gene ID: HRGMv2_0889_17_127
Type: TC
Location: 139589 - 140545 (-)
Gene ID: HRGMv2_0889_17_128
Type: TC
Location: 140701 - 142314 (-)
Gene ID: HRGMv2_0889_17_129
Type: pfam
Location: 142680 - 144620 (-)
Gene ID: HRGMv2_0889_17_130
Type: TC
Location: 144627 - 146309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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